Chemistry

Chemistry

Calendar Publications 2009

Books Published

Postgraduate Chemistry Series. Reaction Mechanisms in Organic Synthesis Rakesh Dr Kumar Parashar  John Wiley and Sons. Chichester, UK. Hardcover • 392 pages • January 2009 • ISBN 978-1-4051-5072-9 Paperback • 392 pages • January 2009 • ISBN 978-1-4051-9089-3

Practical Biotransformations. A Beginner’s Guide Editor James M Coxon. Author GIDEON GROGAN. John Wiley and Sons, Ltd.The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ, United Kingdom
Hard cover 360 pages March 2009 • ISBN 978-1-4051-9367-2
Paperback 360 pages March 2009 • ISBN 978-1-4051-7125-0

Photochemistry of Organic Compounds. From Concepts to Practice Editor James M Coxon. Authors PETR KLÁN and JAKOB WIRZ. John Wiley and Sons, Ltd. The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ, United Kingdom.
Hardcover • 584 pages • February 2009 • ISBN 978-1-4051-9088-6
Paperback • 584 pages • February 2009 • ISBN 978-1-4051-6173-2

Catalysis in Asymmetric Synthesis. 2nd Edition Editor James M Coxon.  Authors VITTORIO CAPRIO and JONATHAN M.J. WILLIAMS, John Wiley and Sons, Ltd. The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ, United Kingdom.
Hardcover • 408 pages • January 2009 • ISBN 978-1-4051-9091-6
Paperback • 408 pages • January 2009 • ISBN 978-1-4051-7519-7

Books Edited

Fairbanks, A.J. Guest Editor, Tetrahedron: Asymmetry, 2009: Volume 20; Issues 6, 7 and 8 (pages: 641-980).

Shaw, I. (Ed.) (2009) Endocrine-Disrupting Chemicals in Food. (1st) New York: CRC Press.

Chapters in Books

Coxon J.M.  Molecular Rearrangements Part 2. Invited review in Organic Reaction Mechanisms 2005  J. Wiley and Sons, Chichester, UK. Editor Knipe A.C. 2009, Chapter 14. 429-500. ISBN 978-0-470-03403-3.

Shaw I.C., Balakrishnan B. and Mitchell, M.D. (2009) The Effect of Dietary Endocrine Disruptors on the Developing Fetus. In I. Shaw (Ed.), Endocrine-Disrupting Chemicals in Food. (3-36). New York: CRC.

Articles/Papers in Refereed Scholarly Journals

Abell, A.D., Jones, M.A., Coxon, J.M., Morton, J.D., Aitken, S.G., McNabb, S.B., Lee, H.Y.Y., Mehrtens, J.M., Alexander, N.A., Stuart, B.G., Neffe, A.T. and Bickerstaffe, R.  Molecular Modeling, Synthesis, and Biological Evaluation of Macrocyclic Calpain Inhibitors. Angew. Chem. Int. Ed. 2009, 48, 1455–1458

Abell, A.D., Alexander, N.A., Aitken, S.G., Chen, H., Coxon, J.M., Jones, M.A., McNabb, S.B., Muscroft-Taylor, A.  The synthesis of macrocyclic β-strand templates by Ring Closing Metathesis. J. Org. Chem. 2009, 74, 4354-4356.

Ali, H.D.P., Quinn, S.J., McCabe, T., Kruger, P.E. and Gunnlaugsson, T., Crystallographic, 1H NMR and CD studies of sterically strained thiourea anion receptors possessing two stereogenic centres. New Journal of Chemistry, 2009, 33, 793–800.

Ayers, B., Long, H., Sim, E., Smellie, I.A., Wilkinson, B.L., Fairbanks, A.J., Stereoselective synthesis of β-arabino glycosyl sulfones as potential inhibitors of mycobacterial cell wall biosynthesis, Carbohydr. Res. 2009, 344, 739-746.

Barner-Kowollik, C. and Russell, G.T. Chain-length-dependent termination in radical polymerization: Subtle revolution in tackling a long-standing challenge. Prog. Polym. Sci., 2009, 34, 1211-1259.

Berenguer, A.; Cantoro, M.; Golovko, V.B.; Hofmann, S.; Wirth, C.T.; Johnson, B.F.G.; Robertson, John. Stable colloidal Co-Pd nanocatalysts for carbon nanotube growth. Physica Status Solidi B: Basic Solid State Physics, 2009, 246, 11-12, 2436-2439.

Blunt, J.W., Copp, B.R., Hu, W-P., Munro, M.H.G., Northcote, P.T. and Prinsep, M.R.  Marine natural products.  Nat. Prod. Rep., 26, 2009, 170-244.

Bones, D.L. and Phillips, L.F., Photolysis in aqueous aerosols: Quantum yields of Fe2+ from a ferrioxalate actinometer and of OH radical from nitrate ions,  Phys. Chem. Chem. Phys., 2009, 11, 5392-5399

Buback, M., Günzler, F., Russell, G.T. & Vana, P. Determination of the Mode of Termination in Radical Polymerization via Mass Spectrometry. Macromolecules, 2009, 42: 652-662.

Bull, J.N., Maclagan, R.G.A.R. and Harland, P.W. Orientation dependence of the Na + CH3NO2 charge-transfer reaction., Molecular Physics, 2009, 107, 1123-1137.

Bull, J.N., Robinson, W.T. and Tennant, W.C., Ferrous ammonium sulphate hexahydrate Mössbauer revisited: a combined 57Fe Mössbauer and X-ray single crystal study, Hyperfine Interactions, 194, 1, 2009, 347-366.

Čižmár, E., Ozerov, M., Wosnitza, J., Zvyagin1, S.A., Krzystek, J., Landee, C.P., Landry, B.R., Turnbull, M.M. and Wikaira, J.L.  J. Phys. Conf. Ser., 2009, 150.042017.

Clearwater, D. J., Hartshorn, R. M., Krumdieck, S. P. Exploring Multiple Precursors in Pulsed Pressure-MOCVD, ECS Trans., 2009, 25, 973-977.

Cochrane, F.C., Cookson, T.V.M., Jameson, G.B., Parker, E.J., Reversing Evolution: Re-establishing Obligate Metal Ion Dependence in a Metal-independent KDO8P Synthase. J. Mol. Biol. 2009, 390, 646-661.

Cottam, J.R.A. and Steel, P.J. New Three- and Four-armed Flexible Bridging Ligands for Use in Metallosupramolecular Chemistry: Syntheses and X-ray Structures. Tetrahedron, 2009, 65(38), 7948-7953.

Cox, D.J., Fairbanks, A.J. Stereoselective synthesis of a-glucosides by neighbouring group participation via an intermediate thiophenium ion, Tetrahedron: Asymmetry 2009, 20, 773-780.

Cruickshank A.C. and Downard A.J. Electrochemical stability of citrate-capped gold nanoparticles electrostatically assembled on amine-modified glassy carbon. Electrochim. Acta,2009, 54, 5566-5570.

Currie, R.B. and Phillips, L.F., Non-Equilibrium Thermodynamics of the Gas-Liquid Interface: Onsager heat of transport for ammonia at the surface of water, J. Non-Eqm. Thermod., 34, 2009, 265-275.

de Silva, E.D., Geiermann, A.-S., Mitova, M.I., Kuegler, P., Blunt, J.W., Cole, A.L.J. and Munro, M.H.G.  Isolation of 2-pyridone alkaloids from a New Zealand marine-derived Penicillium species. J. Nat. Prod., 72, 2009, 477-479.

Downard, A.J. Nanoscale films covalently attached to conducting substrates: structure and dynamic behaviour of the layers. Int. J. Nanotechnology,2009, 6, 233-244.

Drouin, L., Stanca-Kaposta, E.C., Saundh, P., Fairbanks, A.J., Kemper, S., Claridge, T.D.W. and Simons, J.P.  A C-linked Glycomimetic in the Gas Phase and in Solution: Synthesis and Conformation of the Disaccharide Mana (1,6)-C-ManaOPh, Chem. Eur. J., 2009, 15, 4057-4069.

Edwards, S.J., Freeman, C.G. & McEwan, M.J. Some ion chemistry of HC5N. Int. J. Mass Spectrom., 2009, 279, 82-86.

Fitchett, C.M. More bang for your buck: An introduction to CHNO explosives. Chemistry in New Zealand, 73, 2009, 156-160.

Francis, G.F., Langford, V.S., Milligan, D.B. McEwan, M.J. Real Time Monitoring of Hazardous Air Pollutants (HAPs). Anal. Chem., 2009, 81, 1595-1599.

Francis, G.F., Milligan, D.B., McEwan, M.J. Detection and Quantification of Chemical Warfare Agent Precursors by Selected Ion Flow Tube-Mass Spectrometry. Anal. Chem. 2009: 81, 8892-8899.

Ghiviriga, I., El-Gendy, B.E.M., Steel,P.J. and Katritzky, A.R. Tautomerism of Guanidines Studied by 15N NMR: 2-Hydrazono-3-phenylquinazolin-4(3H)-ones and Related Compounds. Org. Biomol. Chem., 2009, 7, 4110-4119.

Heidecke, C.D., Parsons, T.B., Fairbanks, A.J., Endohexosaminidase catalysed glycosylation with oxazoline donors: effects of organic co-solvent and pH on reactions catalysed by Endo A and Endo M, Carbohydr. Res. 2009, 344, 2433-2438.

Herringer, S.N., Turnbull, M.M., Landee, C.P. and Wikaira, J.L., Synthesis, structure, and magnetic properties of bis(3-amino-2-chloropyridinium)tetrahalocuprate(II) [halide = Cl or Br], Journal of Coordination Chemistry, 2009, 62, 863–875.

Hickford, S.J.H., Blunt, J.W. and Munro, M.H.G. Antitumour polyether macrolides: Four new halichondrins from the New Zealand deep-water marine sponge Lissodendoryx sp. Bioorg.  Med. Chem., 17, 2009, 2199-2203.

Jones, M.A., Coxon, J.M., McNabb, S.B., Mehrtens, J.M., Alexander, N.A., Jones, S., Chen, H., Buisan, C. and Abell, A.D. Efficient Large-Scale Synthesis of CAT811, A Potent Calpain Inhibitor of Interest in the Treatment of Cataract, Aust. J. Chem., 2009, 62, 671-675.

Jones, S.A., Jones, M.A., McNabb, S.B., Aitken, S.G., Coxon, J.M., Abell, A.D., N-heterocyclic dipeptide aldehyde calpain inhibitors.  Protein and peptide letters, 2009, 16, 12, 1466-1472.

Katritzky, A.R., Tala, S.R., Abo-Dya, N.E., Gyanda, K., El-Gendy, B.E.M., Abdel-Samii, Z.K. and Steel, P.J. Selective Synthesis and Structural Elucidation of S-Acyl and N-Acylcysteins. J. Org. Chem., 2009, 74, 18, 7165-7167.

Lehr, J., Williamson, B.E., Flavel, B.S., Downard, A.J. Reaction of Gold Substrates with Diazonium Salts in Acidic Solution at Open-Circuit Potential. Langmuir, 2009, 25, 13503-13509.

Lind, S.J., Walsh, T.J., Blackman, A.G., Polson, M.I.J., Irwin, G.I.S. and Gordon, K.C. Trinuclear Copper(I) Complex Containing 3,4,9,10,15,16-Hexamethyl-1,6,7,12,13,18-hexaazatrinaphthylene: A Structural, Spectroscopic and Computational Study. Journal of Physical Chemistry A, 2009, 113, 3566-3575. 

Ling, Z., Suits, M.D.L., Bingham, R.J., Bruce, N.C., Davies, G.J., Fairbanks, A.J. Moir, J.W.B., Taylor, E.J. The X-ray crystal structure of an Arthrobacter protophormiae Endo-β-N-acetylglucosaminidase reveals a (β/α)8 catalytic domain, two ancillary domains and active site residues key for transglycosylation activity, J. Mol. Biol., 2009, 389, 1-9.

Liu X., Baronian, K.H.R. and Downard, A.J. Direct growth of vertically aligned carbon nanotubes on planar carbon substrates by thermal chemical vapour deposition. Carbon, 2009, 47, 500-506.

Mackeen, M.M., Almond, A., Deschamps, M., Cumpstey, I., Fairbanks, A.J., Tsang, C., Rudd, P.M., Butters, T.D., Dwek, R.A., Wormald, M.R., The conformational properties of the Glc3Man unit suggest conformational biasing within the chaperone assisted glycoprotein folding pathway, J. Mol. Biol. 2009, 387, 335-347.

McDowell, S.A.C., Golovko, V.B. A computational study of a novel seven-membered cyclic diyne and its cobalt–carbonyl complex, Journal of Molecular Structure: THEOCHEM, 2009, 909, 111–115.

McGavin, D.G.1 and Tennant, W.C., Higher-order Zeeman and spin terms in the electron paramagnetic resonance spin Hamiltonian; their description in irreducible form using Cartesian, tesseral spherical tensor and Stevens' operator expressions, J. Phys.: Condens. Matter, 21, 2009, 245501.

Mobinikhaledi, A., Steel, P.J. and Polson, M. Rapid and Efficient Synthesis of Schiff Bases Catalysed by Copper Nitrate. Synth. React. Inorg. Met.-Org Nano-Met. Chem., 2009, 39, 189-192.

Mobinikhaledi, A. and Steel, P.J.  Synthesis of Perimidines Using Copper Nitrate as an Efficient Catalyst. Synth. React. Inorg. Met.-Org Nano-Met. Chem., 2009, 39, 133-135.

Parsons, T.B., Moir, J.W.B., Fairbanks, A.J. Synthesis of a truncated bi-antennary complex type N-glycan oxazoline; glycosylation catalysed by the endohexosaminidases Endo A and Endo M, Org. Biomol. Chem. 2009, 3128-3140.

Pelleteret, D., Clerac, R., Mathoniere, C., Harte, E., Schmitt, W. and Kruger, P.E., Asymmetric Spin-crossover Behaviour and Evidence of Light-induced Excited Spin State Trapping in a Dinuclear Iron(II) Helicate. Chemical Communications, 2009, 221-223.

Peterson, S.S., Kirby, T., Kadarkaraisamy, M., Hartshorn, R.M., Sykes, A.G. Chelating, bridging, and chain structures within Ag(I) and Cu(I) complexes of bis(nicotinyloxy), bis(isonicotinyloxy), and bis (pyrimidine-5-carboxyloxy)-1,8-disubstituted anthraquinone ligands, Polyhedron, 2009, 28,3031-3035.

Phillips, L.F., Pressure independence of the Onsager heat of transport at a gas-liquid interface: a theoretical problem, Chem. Phys. Lett., 476, 2009, 28–30.

Powell, K.J., Brown, P.L., Byrne, R.H., Gajda, T., Hefter, G., Leuz, A., Sjöberg S., and Wanner, H., Chemical speciation of environmentally significant metals with inorganic ligands. Part 3: The Pb2+ + OH–, Cl–, CO32–, SO42–, and PO43– systems, Pure Appl. Chem., 2009, 81, 12, 2425-2476.

Phillips, L.F. Pressure independence of the Onsager heat of transport at a gas-liquid interface: A theoretical problem,Chemical Physics Letters, 2009, 476, 28-30.

Pratt, A.J. Darwin's dangerous ideas and the evolution of their impact. NZ Science Teacher, 2009 122.

Pratt, A.J., Golovko, V.B., Toombs-Ruane, H., FeS Surface Dynamics & Molecular Evolution, Origins of Life and Evolution of Biospheres, 2009, 39, 165-166.

Russell, G.T. Real and apparent sources of polydispersity in molecular weight distributions from radical polymerization. Am. Chem. Soc., Symp. Ser., 2009, 1023, 15-31.

Schadich, E., Cole, A.L.J., Squire, M., Mason, D., Skin peptides of different life stages of Ewing's tree frog Journal of Experimental Zoology Part A: Ecological Genetics and Physiology, 2009, 313A, 532-537.

Senthilmohan, S.T., Davis, B.M., Wilson, P.F., McEwan, M.J. Improved Peroxyl Radical Scavenging TOSC Assay to Quantify Antioxidant Capacity Using SIFT-MS. Redox Report,  2009, 14, 197-204.

Shaw, I.C. and Graham, L.A. Xenoestrogens: The Ultimate Biochemical Feminists.Pharmaceutical Medicine, 2009, 23, 5-6, 273-274.

Sumby, C.J., Leita, B.A., Moubaraki, B., Murray, K.S. and Steel, P.J. Synthesis and Coordination Chemistry of Doubly-Tridentate Tripodal Pyridazine and Pyrimidine-Derived Ligands: Structural Interplay Between M2L and M2L2 (M=Ni and Pd) Complexes and Magnetic Properties of Iron(II) Complexes. Aust. J. Chem., 2009, 62, 1142-1154.

van Dijkum, E., Danac, R., Hughes, D.J., Wood, R., Rees, A., Wilkinson, B.L., Fairbanks, A.J.  Synthesis of glucose derivatives modified at the 4-OH as potential chain-terminators of cellulose biosynthesis; herbicidal activity of simple monosaccharide derivatives, Org. Biomol. Chem. 2009, 7, 1097-1105.

Veale, E.B., Tocci, G.M., Pfeffer, F.M., Kruger, P.E. and Gunnlaugsson, T., Demonstration of bidirectional photoinduced electron transfer (PET) sensing in 4-amino-1,8-naphthalimide based thiourea anion sensors.Organic and Biomolecular Chemistry, 2009, 7, 3447-3454.

Via, B.K., So, C.L., Shupe, T.F., Groom, L.H., Wikaira, J.L., Mechanical response of longleaf pine to variation in microfibril angle, chemistry associated wavelengths, density, and radial position., Composites: Part A,  2009, 40, 60–66.

Walsh, D.P., Clérac, R., Hearns, N.G.R., Kruger, P.E. and Schmitt, W., Modulating topologies and magnetic properties of coordination polymers using 2,2'-bipyridine and 5-aminodiacetic isophthalic acid as ligands.Crystal Engineering Communications, 2009, 11, 1666-1673.

Walker, S.R.; Cumming, H.; Parker, E.J., Substrate and reaction intermediate mimics as inhibitors of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase. Org. Biomol. Chem. 2009, 7, 3031-3035.

Wikaira, J.L., Li, L. and Turnbull, M.M. Copper Halide Salts of 2-Amino-3-Chloro-5-Trifluoromethylpyridine. Abstracts, 36th Northeast Regional Meeting of the American Chemical Society, Hartford, CT, United States, October 7-10 2009, NERM-308.

Yeoh, K.K., Butters, T.D., Wilkinson, B.L. and Fairbanks, A.J., Probing Replacement of Pyrophosphate via Click Chemistry; Synthesis of UDP-Sugar Analogues as Potential Glycosyl Transferase Inhibitors, Carbohydr. Res., 2009, 344, 586-591.

Zaman, S., Abell, A.D.  A Robust and Recyclable ruthenium catalyst immobilised on polyethylene glycol. Tetrahedron Letters.2009, 50, 5340-5343.

Zaman, S., Curnow, O.J., and Abell, A.D., Development of Aqueous metathesis Catalysts, Aust. J. Chem., 2009, 62, 91-100.

Zimmermann, K., Engeser, M., Blunt, J.W., Munro, M.H.G. and Piel, J.  Pederin-Type Pathways of Uncultivated Bacterial Symbionts: Analysis of O-Methyltransferases and Generation of a Biosynthetic Hybrid.  J. Amer.  Chem. Soc. 131, 2009, 2780-­2781.

Unrefereed Papers, Publications and Proceedings

Fairbanks, A.J. Special issue in celebration of the 65th birthday of Professor George Fleet, Tetrahedron: Asymmetry, 2009, 20, 641-643.

Gaw, S.K. Identification of potential health and safety issues associated with MacDiarmid Institute funded nanomaterial research in university laboratories. Report prepared for the MacDiarmid Institute 2009.

Herringer, S.N., Longendyke, A., Turnbull, M.M., Landee, C.P., Wikaira, J.L., Jameson, G.B. and Telfer, S.  Synthesis, Structure, and Magnetic Properties of Bis(S-pyrazine)Dihalocopper (II) [S = Cl, CN, OCH3, or OCH2CH3 and Halide= Cl or Br]. Abstracts, 36th Northeast Regional Meeting of the American Chemical Society, Hartford, CT, United States, October 7-10, 2009, NERM-309.

Patents

Weber, J.-F. R., Ramasamy, K., Bakar, H.A., Majeed, A.B.B.A., Blunt, J.W., Cole, A.L.J., Munro, M.H.G. and Sun, L. Bioactive Compounds. PCT Int. Appl. PTO9.14, Malaysian Patent Office, 3 November 2009.

Ph.D. Theses

David Bones (2009) Liquid Aerosol Photochemistry.

Jennifer Burgess (2009)  Aspects of Metallosupramolecular Chemistry

Edwards, Sam (2009) Experimental Studies of Ion-neutral Chemistry related to the Extraterrestrial Environment.

Walker, Scott R. (2009)  Design, Synthesis and Characterisation of Inhibitors of 3-Deoxy-Darabino-Heptulosonate 7-Phosphate Synthase.

M.Sc. Thesis

Cummings, Hemi (2009) Probing the substrate specificity of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase and 3-deoxy-D-manno-octulosonate 8-phosphate synthase using analogues of phosphoenolpyruvate.

Wilson-Coutts, Sarah (2009) Hons The Synthesis and Configuration of Some Polydentate Amino Acid Complexes of Cobalt(III).

Crawley, Louise (2009)– Application of Non-Dispersive Infrared (NDIR) Spectroscopy to the Measurement of Atmospheric Trace Gases.

Thornley, Paul (2009) - The Synthesis and Characterisation of a Novel Polyamine-Terpyridine Ligand and Related Complexes.

Clearwater, Deborah (2009) - Bio-Compatible Coatings for Bone Implants.